0:20:05drmeisterI need to dock the spiroligomer against the protein.
0:20:49drmeisterSo I want to pick three atoms on the protein and three atoms on the spiroligomer and then add rubber band restraints that will pull them together.
0:21:45drmeisterI'm going to need to label the atoms with a residue index and atom name. The atom name will be unique to each residue index.