Search
Sunday, 20th of November 2022, 18:04:24 UTC
18:05:58
yitzi
I think there is kind of three levels: 1) daily in cando repo, 2) add systems to cando-user-install for rebuilding snapshot from quickclasp, 3) use quickload with quickclasp for instantaneous updates.
18:07:16
drmeister
Oh - I hadn't thought about cando-user-install
18:07:36
drmeister
How would that get added?
18:08:58
yitzi
Add the system(s) as an dependency to cando-jupyter....that's it
18:10:11
yitzi
You'll still need to rebuild cando to update the asdf for cando-jupyter, but you put the dependencies into quickclasp until they have stabilized. Then put them into the cando repo.
18:16:23
drmeister
I'll head out to Blue Bell and see what's up.
18:32:10
drmeister
I'm getting "Error displaying widget: model not found" on bigmac and I had molecules displaying yesterday.
18:32:24
drmeister
yitzi: Can you remind me again what can cause this?
18:33:12
drmeister
I just ran brew upgrade and cando-user-install on this machine.
18:33:48
drmeister
cando-user-install is still running - it's building quicklisp code. The kernel I'm running is my development kernel.
18:34:01
yitzi
Crap. Maybe there is some version problem with the jupyter-labextensions.
18:34:22
yitzi
Can you look at the Javascript console?
18:34:29
drmeister
https://www.irccloud.com/pastebin/UYm96j4A/
18:35:34
drmeister
https://usercontent.irccloud-cdn.com/file/brrx9YvG/image.png
18:36:52
yitzi
Remove the sidecar widget
18:37:41
yitzi
Then `jupyter-labextensions update`
18:37:46
yitzi
And restart the Jupyter Lab instance.
18:39:18
drmeister
What do you recommend about that widget going forward? It sounds like a bad actor
18:41:26
drmeister
No - that doesn't fix the problem.
18:42:08
yitzi
Just a sec...it probably is related
18:43:40
yitzi
`jupyter-labextension install @jupyter-widgets/jupyterlab-manager`
18:44:02
yitzi
then `jupyter-labextension build`
18:52:54
yitzi
Do `jupyter-labextension list` afterward
18:55:57
drmeister
https://www.irccloud.com/pastebin/UXFwy4lk/
18:57:26
yitzi
Its the bottom notification that I worried about
18:58:12
yitzi
Try `jupyter labextension update --all`
18:59:48
drmeister
https://www.irccloud.com/pastebin/O9YBgMhp/
19:00:05
drmeister
Is there anything else I can clean out?
19:01:31
yitzi
I think that anaconda crap is interfering
19:02:09
yitzi
You've got v3 of the manager and you need v5
19:02:21
yitzi
G-d I hate fricking conda.
19:02:33
drmeister
Since yesterday this happened?
19:03:20
yitzi
Is that how you installed JupyterLab? If so don't remove it.
19:03:50
drmeister
I don't remember now.
19:04:12
yitzi
Maybe we should start removing extensions....
19:04:15
drmeister
Yeah - that's probably how I installed it.
19:05:42
yitzi
`jupyter-labextension uninstall jupyterlab-plotly @pyviz/jupyterlab_pyviz @jupyter-widgets/jupyterlab-manager cytoscape-clj jupyterlab-debugger-restarts jupyterlab-molviewer kekule-clj ngl-clj resizable-box-clj`
19:06:06
yitzi
Let's see if we can get an empty extension list first.
19:07:59
drmeister
https://www.irccloud.com/pastebin/kIWnrR89/
19:10:56
yitzi
Ok, yeah. conda is interfering
19:11:08
yitzi
Can you list the extensions again?
19:11:34
yitzi
nvm You did that at the end
19:12:09
yitzi
try using "conda remove" to get rid of the first three
19:13:50
yitzi
They may have different package names in conda, so you may have to list the installed packages
19:17:35
yitzi
conda has the dumbest version resolver in history. It always installs the oldest, most broken version when I use it.
19:19:07
drmeister
After removing that I have this...
19:19:09
drmeister
https://www.irccloud.com/pastebin/grUib2Uz/
19:19:47
drmeister
conda remove jupyterlab?
19:20:00
drmeister
These are my options:
19:20:01
drmeister
https://www.irccloud.com/pastebin/WUD0QoEG/
19:21:55
yitzi
Remove jupyterlab_widgets
19:25:19
drmeister
https://www.irccloud.com/pastebin/DP3hSFuG/
19:25:40
drmeister
Now cando-user-install?
19:26:46
yitzi
No, lets do it by hand....
19:27:18
yitzi
`jupyter-labextension install @jupyter-widgets/jupyterlab-manager cytoscape-clj jupyterlab-debugger-restarts jupyterlab-molviewer kekule-clj ngl-clj resizable-box-clj`
19:32:37
drmeister
Here's the install and the list
19:32:38
drmeister
https://www.irccloud.com/pastebin/NdgvpIgK/
19:32:51
drmeister
Can I try jupyter-lab now?
19:37:22
drmeister
Can I call you later about this and what we do about it?
19:37:33
drmeister
I need to drive to Blue Bell.
Monday, 21st of November 2022, 6:04:24 UTC