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21:44:25
attila_lendvai
drmeister: let me know if I should push that into dev. it's only moderately tested. alternatively, you can test it locally by editing fetch-git-repos.sh to use git reset --merge
21:45:36
drmeister
Let's hold off for now - I have a demo to give on Tuesday and we need to stabilize things.
21:56:50
drmeister
Kevslinger: Re: cytoscape-jupyter - after we installed webpack on your system. Did you try 'make'?
21:58:04
Kevslinger
Yes, I got a permission denied error from some part of python. So I tried ‘sudo make’ and got a few operation denied or operation failed errors
22:12:52
drmeister
Kevslinger: Have you been able to get the cytoscape-jupyter thing to display anything?
22:14:22
Kevslinger
I’m on mobile and not at my computer at the moment. Once I get back, I’ll check the error I got.
22:18:05
shiho
drmeister: I got the error.... Too many heap sections: Increase MAXHINCR or MAX_HEAP_SECTS
0:06:28
Kevslinger
As soon as this gets figured out and we can get the python to work to see what JSON messages the graph is sending, this should be easy..
1:23:49
drmeister
cytoscape-jupyter was put online about a year ago - since then there have been three (3!) major revisions of 'webpack'. Cytoscape-jupyter needs webpack version 1.12.14. Once I evaluated the commands I just pasted in the bash shell I was able to run 'make' in cytoscape-jupyter and it got a lot further.
1:38:07
drmeister
After installing webpack@1.12.14 (and maybe uninstalling the other webpack first) I ran 'make' again in jupyter-cytoscape and then the demo started up.
1:39:52
drmeister
The 'make' starts up jupyterlab on my machine and the widget doesn't work. But when I backup to the jupyter file browser...
1:41:09
drmeister
and start the smallNetwork.ipynb and then shift-click through the entire notebook - then the demo works.
1:45:12
Kevslinger
This is splendid. Once we figure out how the Python packages the JSON, all we need to do is mimic it
1:51:01
stassats
clasp itself has multiple compilers, interpreters, garbage collectors, and requires another lisp implementation to build